J4_6GZQ_009
3D structure
- PDB id
- 6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- UUGC*GCGGC*GUCCUAAGGUAG*CGAAAA
- Length
- 27 nucleotides
- Bulged bases
- 6GZQ|1|A1|A|1995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZQ|1|A1|U|1866
6GZQ|1|A1|U|1867
6GZQ|1|A1|G|1868
6GZQ|1|A1|C|1869
*
6GZQ|1|A1|G|1928
6GZQ|1|A1|C|1929
6GZQ|1|A1|G|1930
6GZQ|1|A1|G|1931
6GZQ|1|A1|C|1932
*
6GZQ|1|A1|G|1946
6GZQ|1|A1|U|1947
6GZQ|1|A1|C|1948
6GZQ|1|A1|C|1949
6GZQ|1|A1|U|1950
6GZQ|1|A1|A|1951
6GZQ|1|A1|A|1952
6GZQ|1|A1|G|1953
6GZQ|1|A1|G|1954
6GZQ|1|A1|U|1955
6GZQ|1|A1|A|1956
6GZQ|1|A1|G|1957
*
6GZQ|1|A1|C|1991
6GZQ|1|A1|G|1992
6GZQ|1|A1|A|1993
6GZQ|1|A1|A|1994
6GZQ|1|A1|A|1995
6GZQ|1|A1|A|1996
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain C1
- 50S ribosomal protein L2
- Chain V2
- Ribosome hibernation promoting factor
Coloring options: