J4_6GZQ_011

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGGGCU*GGAC*GGAAG*CGCC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A1|G|2656
6GZQ|1|A1|G|2657
6GZQ|1|A1|G|2658
6GZQ|1|A1|G|2659
6GZQ|1|A1|C|2660
6GZQ|1|A1|U|2661
*
6GZQ|1|A1|G|2687
6GZQ|1|A1|G|2688
6GZQ|1|A1|A|2689
6GZQ|1|A1|C|2690
*
6GZQ|1|A1|G|2746
6GZQ|1|A1|G|2747
6GZQ|1|A1|A|2748
6GZQ|1|A1|A|2749
6GZQ|1|A1|G|2750
*
6GZQ|1|A1|C|2784
6GZQ|1|A1|G|2785
6GZQ|1|A1|C|2786
6GZQ|1|A1|C|2787

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain D1

50S ribosomal protein L3

Chain I1

50S ribosomal protein L13

Chain J1

50S ribosomal protein L14