J4_6I9R_003

3D structure

PDB id

6I9R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I9R|1|A|G|2492
6I9R|1|A|C|2493
6I9R|1|A|C|2494
6I9R|1|A|U|2495
6I9R|1|A|G|2496
*
6I9R|1|A|C|2508
6I9R|1|A|A|2509
6I9R|1|A|U|2510
6I9R|1|A|C|2511
6I9R|1|A|A|2512
6I9R|1|A|C|2513
*
6I9R|1|A|G|2537
6I9R|1|A|C|2538
6I9R|1|A|A|2539
6I9R|1|A|C|2540
6I9R|1|A|C|2541
6I9R|1|A|G|2542
*
6I9R|1|A|C|2637
6I9R|1|A|U|2638
6I9R|1|A|C|2639
6I9R|1|A|C|2640
6I9R|1|A|A|2641
6I9R|1|A|C|2642

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial