J4_6MEC_004

3D structure

PDB id

6MEC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a group II intron retroelement after DNA integration

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUU*AAG*CG*UUUG

Length

12 nucleotides

Bulged bases

6MEC|1|A|U|780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MEC|1|A|C|585
6MEC|1|A|U|586
6MEC|1|A|U|587
*
6MEC|1|A|A|744
6MEC|1|A|A|745
6MEC|1|A|G|746
*
6MEC|1|A|C|757
6MEC|1|A|G|758
*
6MEC|1|A|U|779
6MEC|1|A|U|780
6MEC|1|A|U|781
6MEC|1|A|G|782

Current chains

Chain A

T.el4h RNA

Nearby chains