J4_6MTC_007

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

6MTC|1|5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|5|G|2618
6MTC|1|5|G|2619
*
6MTC|1|5|U|2637
6MTC|1|5|G|2638
6MTC|1|5|U|2639
6MTC|1|5|G|2640
6MTC|1|5|A|2641
6MTC|1|5|A|2642
*
6MTC|1|5|U|2692
6MTC|1|5|G|2693
6MTC|1|5|G|2694
6MTC|1|5|A|2695
6MTC|1|5|A|2696
6MTC|1|5|A|2697
6MTC|1|5|G|2698
*
6MTC|1|5|U|2718
6MTC|1|5|C|2719

Current chains

Chain 5

28S rRNA

Nearby chains

Chain R

60S ribosomal protein L19

Chain U

60S ribosomal protein L22

Chain g

60S ribosomal protein L34

Chain k

60S ribosomal protein L38