J4_6MTE_005

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

6MTE|1|5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|G|2618
6MTE|1|5|G|2619
*
6MTE|1|5|U|2637
6MTE|1|5|G|2638
6MTE|1|5|U|2639
6MTE|1|5|G|2640
6MTE|1|5|A|2641
6MTE|1|5|A|2642
*
6MTE|1|5|U|2692
6MTE|1|5|G|2693
6MTE|1|5|G|2694
6MTE|1|5|A|2695
6MTE|1|5|A|2696
6MTE|1|5|A|2697
6MTE|1|5|G|2698
*
6MTE|1|5|U|2718
6MTE|1|5|C|2719

Current chains

Chain 5

28S rRNA

Nearby chains

Chain R

eL19

Chain U

eL22

Chain g

eL34

Chain k

eL38