J4_6N8K_007
3D structure
- PDB id
- 6N8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUAAGG*CUUGAUU*AACCA*UGUG
- Length
- 22 nucleotides
- Bulged bases
- 6N8K|1|1|A|2657
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8K|1|1|C|2654
6N8K|1|1|U|2655
6N8K|1|1|A|2656
6N8K|1|1|A|2657
6N8K|1|1|G|2658
6N8K|1|1|G|2659
*
6N8K|1|1|C|2711
6N8K|1|1|U|2712
6N8K|1|1|U|2713
6N8K|1|1|G|2714
6N8K|1|1|A|2715
6N8K|1|1|U|2716
6N8K|1|1|U|2717
*
6N8K|1|1|A|2739
6N8K|1|1|A|2740
6N8K|1|1|C|2741
6N8K|1|1|C|2742
6N8K|1|1|A|2743
*
6N8K|1|1|U|2750
6N8K|1|1|G|2751
6N8K|1|1|U|2752
6N8K|1|1|G|2753
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
- Chain o
- 60S ribosomal protein L29
- Chain q
- 60S ribosomal protein L42-A
- Chain v
- 60S ribosomal export protein NMD3
Coloring options: