J4_6NQB_001

3D structure

PDB id

6NQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAG*CAUAACG*CCAAAG*UGCC

Length

21 nucleotides

Bulged bases

6NQB|1|A|C|183, 6NQB|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NQB|1|A|G|141
6NQB|1|A|G|142
6NQB|1|A|A|143
6NQB|1|A|G|144
*
6NQB|1|A|C|178
6NQB|1|A|A|179
6NQB|1|A|U|180
6NQB|1|A|A|181
6NQB|1|A|A|182
6NQB|1|A|C|183
6NQB|1|A|G|184
*
6NQB|1|A|C|193
6NQB|1|A|C|194
6NQB|1|A|A|195
6NQB|1|A|A|196
6NQB|1|A|A|197
6NQB|1|A|G|198
*
6NQB|1|A|U|219
6NQB|1|A|G|220
6NQB|1|A|C|221
6NQB|1|A|C|222

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain T

30S ribosomal protein S20