J4_6NWY_002

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAGG*CCAUGUGG*CCAAAG*CGC

Length

21 nucleotides

Bulged bases

6NWY|1|QA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NWY|1|QA|G|142
6NWY|1|QA|A|143
6NWY|1|QA|G|144
6NWY|1|QA|G|145
*
6NWY|1|QA|C|177
6NWY|1|QA|C|178
6NWY|1|QA|A|179
6NWY|1|QA|U|180
6NWY|1|QA|G|181
6NWY|1|QA|U|182
6NWY|1|QA|G|183
6NWY|1|QA|G|184
*
6NWY|1|QA|C|193
6NWY|1|QA|C|194
6NWY|1|QA|A|195
6NWY|1|QA|A|196
6NWY|1|QA|A|197
6NWY|1|QA|G|198
*
6NWY|1|QA|C|219
6NWY|1|QA|G|220
6NWY|1|QA|C|221

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20