J4_6NWY_005

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CU*GAGUAC*GGAAUCUGG*CUAAG

Length

22 nucleotides

Bulged bases

6NWY|1|RA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NWY|1|RA|C|268
6NWY|1|RA|U|269
*
6NWY|1|RA|G|370
6NWY|1|RA|A|371
6NWY|1|RA|G|372
6NWY|1|RA|U|373
6NWY|1|RA|A|374
6NWY|1|RA|C|375
*
6NWY|1|RA|G|399
6NWY|1|RA|G|400
6NWY|1|RA|A|401
6NWY|1|RA|A|402
6NWY|1|RA|U|403
6NWY|1|RA|C|404
6NWY|1|RA|U|405
6NWY|1|RA|G|406
6NWY|1|RA|G|407
*
6NWY|1|RA|C|420
6NWY|1|RA|U|421
6NWY|1|RA|A|422
6NWY|1|RA|A|423
6NWY|1|RA|G|424

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R1

50S ribosomal protein L28

Chain RI

50S ribosomal protein L9