J4_6O8X_008

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

GACUG*CACAG*UGACG*CGUAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O8X|1|A|G|1786
6O8X|1|A|A|1787
6O8X|1|A|C|1788
6O8X|1|A|U|1789
6O8X|1|A|G|1790
*
6O8X|1|A|C|1802
6O8X|1|A|A|1803
6O8X|1|A|C|1804
6O8X|1|A|A|1805
6O8X|1|A|G|1806
*
6O8X|1|A|U|1841
6O8X|1|A|G|1842
6O8X|1|A|A|1843
6O8X|1|A|C|1844
6O8X|1|A|G|1845
*
6O8X|1|A|C|1988
6O8X|1|A|G|1989
6O8X|1|A|U|1990
6O8X|1|A|A|1991
6O8X|1|A|A|1992
6O8X|1|A|C|1993

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA