J4_6O8X_012

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

GAGUAACAC*GGU*AUAG*CC

Length

18 nucleotides

Bulged bases

6O8X|1|a|C|126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O8X|1|a|G|120
6O8X|1|a|A|121
6O8X|1|a|G|122
6O8X|1|a|U|123
6O8X|1|a|A|124
6O8X|1|a|A|125
6O8X|1|a|C|126
6O8X|1|a|A|127
6O8X|1|a|C|128
*
6O8X|1|a|G|253
6O8X|1|a|G|254
6O8X|1|a|U|255
*
6O8X|1|a|A|301
6O8X|1|a|U|302
6O8X|1|a|A|303
6O8X|1|a|G|304
*
6O8X|1|a|C|326
6O8X|1|a|C|327

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17