J4_6O9K_005

3D structure

PDB id

6O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGUUCC*GGGUGAG*CU*AAUCGUAC

Length

23 nucleotides

Bulged bases

6O9K|1|A|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O9K|1|A|G|1310
6O9K|1|A|G|1311
6O9K|1|A|U|1312
6O9K|1|A|U|1313
6O9K|1|A|C|1314
6O9K|1|A|C|1315
*
6O9K|1|A|G|1337
6O9K|1|A|G|1338
6O9K|1|A|G|1339
6O9K|1|A|U|1340
6O9K|1|A|G|1341
6O9K|1|A|A|1342
6O9K|1|A|G|1343
*
6O9K|1|A|C|1404
6O9K|1|A|U|1405
*
6O9K|1|A|A|1597
6O9K|1|A|A|1598
6O9K|1|A|U|1599
6O9K|1|A|C|1600
6O9K|1|A|G|1601
6O9K|1|A|U|1602
6O9K|1|A|A|1603
6O9K|1|A|C|1604

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L34

Chain T

50S ribosomal protein L23