J4_6OF6_020
3D structure
- PDB id
- 6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UAUAG*CGCU*AGAGGUCAGC*GCUUA
- Length
- 24 nucleotides
- Bulged bases
- 6OF6|1|XY|U|8, 6OF6|1|XY|U|47, 6OF6|1|XY|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OF6|1|XY|U|6
6OF6|1|XY|A|7
6OF6|1|XY|U|8
6OF6|1|XY|A|9
6OF6|1|XY|G|10
*
6OF6|1|XY|C|25
6OF6|1|XY|G|26
6OF6|1|XY|C|27
6OF6|1|XY|U|28
*
6OF6|1|XY|A|42
6OF6|1|XY|G|43
6OF6|1|XY|A|44
6OF6|1|XY|G|45
6OF6|1|XY|G|46
6OF6|1|XY|U|47
6OF6|1|XY|C|48
6OF6|1|XY|A|49
6OF6|1|XY|G|50
6OF6|1|XY|C|51
*
6OF6|1|XY|G|63
6OF6|1|XY|C|64
6OF6|1|XY|U|65
6OF6|1|XY|U|66
6OF6|1|XY|A|67
Current chains
- Chain XY
- A-site tRNAAla(GGC)
Nearby chains
- Chain XA
- Small subunit ribosomal RNA; SSU rRNA
- Chain XM
- 30S ribosomal protein S13
- Chain XS
- 30S ribosomal protein S19
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
- Chain YQ
- 50S ribosomal protein L16
- Chain YZ
- 50S ribosomal protein L25
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