J4_6OLG_007

3D structure

PDB id

6OLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUG*CGG*CUUAAGGUAG*UGAAUG

Length

22 nucleotides

Bulged bases

6OLG|1|A2|U|3789

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLG|1|A2|C|3667
6OLG|1|A2|U|3668
6OLG|1|A2|G|3669
*
6OLG|1|A2|C|3723
6OLG|1|A2|G|3724
6OLG|1|A2|G|3725
*
6OLG|1|A2|C|3742
6OLG|1|A2|U|3743
6OLG|1|A2|U|3744
6OLG|1|A2|A|3745
6OLG|1|A2|A|3746
6OLG|1|A2|G|3747
6OLG|1|A2|G|3748
6OLG|1|A2|U|3749
6OLG|1|A2|A|3750
6OLG|1|A2|G|3751
*
6OLG|1|A2|U|3785
6OLG|1|A2|G|3786
6OLG|1|A2|A|3787
6OLG|1|A2|A|3788
6OLG|1|A2|U|3789
6OLG|1|A2|G|3790

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain An

60S ribosomal protein L41

Chain B1

Small subunit ribosomal RNA; SSU rRNA

Chain Bv

Transfer RNA; tRNA