3D structure

PDB id
6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
UC*GGUCAG*UC*GGCCGUA
Length
17 nucleotides
Bulged bases
6OLZ|1|A2|C|2416
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OLZ|1|A2|U|2388
6OLZ|1|A2|C|2389
*
6OLZ|1|A2|G|2413
6OLZ|1|A2|G|2414
6OLZ|1|A2|U|2415
6OLZ|1|A2|C|2416
6OLZ|1|A2|A|2417
6OLZ|1|A2|G|2418
*
6OLZ|1|A2|U|2517
6OLZ|1|A2|C|2518
*
6OLZ|1|A2|G|2756
6OLZ|1|A2|G|2757
6OLZ|1|A2|C|2758
6OLZ|1|A2|C|2759
6OLZ|1|A2|G|2760
6OLZ|1|A2|U|2761
6OLZ|1|A2|A|2762

Current chains

Chain A2
28S ribosomal RNA

Nearby chains

Chain A3
5.8S ribosomal RNA; 5.8S rRNA
Chain AR
60S ribosomal protein L19
Chain AX
60S ribosomal protein L23a
Chain Ag
60S ribosomal protein L34
Chain Ah
60S ribosomal protein L35
Chain Ak
60S ribosomal protein L38
Chain Al
60S ribosomal protein L39

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1423 s