J4_6OLZ_007

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GACUG*CAAAG*UGAUUUC*GGAUGAAC

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLZ|1|A2|G|3605
6OLZ|1|A2|A|3606
6OLZ|1|A2|C|3607
6OLZ|1|A2|U|3608
6OLZ|1|A2|G|3609
*
6OLZ|1|A2|C|3621
6OLZ|1|A2|A|3622
6OLZ|1|A2|A|3623
6OLZ|1|A2|A|3624
6OLZ|1|A2|G|3625
*
6OLZ|1|A2|U|3661
6OLZ|1|A2|G|3662
6OLZ|1|A2|A|3663
6OLZ|1|A2|U|3664
6OLZ|1|A2|U|3665
6OLZ|1|A2|U|3666
6OLZ|1|A2|C|3667
*
6OLZ|1|A2|G|3790
6OLZ|1|A2|G|3791
6OLZ|1|A2|A|3792
6OLZ|1|A2|U|3793
6OLZ|1|A2|G|3794
6OLZ|1|A2|A|3795
6OLZ|1|A2|A|3796
6OLZ|1|A2|C|3797

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain An

60S ribosomal protein L41

Chain Ap

60S ribosomal protein L37a

Chain B1

Small subunit ribosomal RNA; SSU rRNA