Loop J4_6OLZ

3D structure

PDB id: 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
Description: Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å

Loop

Sequence: CUUGUCU*AAAAAUAACAA*UUGGAAUGAGUCCACUUUAAAUCCUUUAACGAGGAUCCAU*AUAG
Length: 62 nucleotides
Bulged bases: 6OLZ|1|B1|A|560, 6OLZ|1|B1|A|590, 6OLZ|1|B1|C|593
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6OLZ|1|B1|C|30
6OLZ|1|B1|U|31
6OLZ|1|B1|U|32
6OLZ|1|B1|G|33
6OLZ|1|B1|U|34
6OLZ|1|B1|C|35
6OLZ|1|B1|U|36
*
6OLZ|1|B1|A|519
6OLZ|1|B1|A|520
6OLZ|1|B1|A|521
6OLZ|1|B1|A|522
6OLZ|1|B1|A|523
6OLZ|1|B1|U|524
6OLZ|1|B1|A|525
6OLZ|1|B1|A|526
6OLZ|1|B1|C|527
6OLZ|1|B1|A|528
6OLZ|1|B1|A|529
*
6OLZ|1|B1|U|556
6OLZ|1|B1|U|557
6OLZ|1|B1|G|558
6OLZ|1|B1|G|559
6OLZ|1|B1|A|560
6OLZ|1|B1|A|561
6OLZ|1|B1|U|562
6OLZ|1|B1|G|563
6OLZ|1|B1|A|564
6OLZ|1|B1|G|565
6OLZ|1|B1|U|566
6OLZ|1|B1|C|567
6OLZ|1|B1|C|568
6OLZ|1|B1|A|569
6OLZ|1|B1|C|570
6OLZ|1|B1|U|571
6OLZ|1|B1|U|572
6OLZ|1|B1|U|573
6OLZ|1|B1|A|574
6OLZ|1|B1|A|575
6OLZ|1|B1|A|576
6OLZ|1|B1|U|577
6OLZ|1|B1|C|578
6OLZ|1|B1|C|579
6OLZ|1|B1|U|580
6OLZ|1|B1|U|581
6OLZ|1|B1|U|582
6OLZ|1|B1|A|583
6OLZ|1|B1|A|584
6OLZ|1|B1|C|585
6OLZ|1|B1|G|586
6OLZ|1|B1|A|587
6OLZ|1|B1|G|588
6OLZ|1|B1|G|589
6OLZ|1|B1|A|590
6OLZ|1|B1|U|591
6OLZ|1|B1|C|592
6OLZ|1|B1|C|593
6OLZ|1|B1|A|594
6OLZ|1|B1|U|595
*
6OLZ|1|B1|A|641
6OLZ|1|B1|U|642
6OLZ|1|B1|A|643
6OLZ|1|B1|G|644

Current chains

Chain B1: 18S ribosomal RNA

Nearby chains

Chain BJ: 40S ribosomal protein S9
Chain BX: 40S ribosomal protein S23
Chain BY: 40S ribosomal protein S24
Chain Be: 40S ribosomal protein S30

J4_6OLZ_011