J4_6OLZ_012

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CAUUAAAUC*GCCC*GGUGACG*CGG

Length

23 nucleotides

Bulged bases

6OLZ|1|B1|G|407

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLZ|1|B1|C|98
6OLZ|1|B1|A|99
6OLZ|1|B1|U|100
6OLZ|1|B1|U|101
6OLZ|1|B1|A|102
6OLZ|1|B1|A|103
6OLZ|1|B1|A|104
6OLZ|1|B1|U|105
6OLZ|1|B1|C|106
*
6OLZ|1|B1|G|355
6OLZ|1|B1|C|356
6OLZ|1|B1|C|357
6OLZ|1|B1|C|358
*
6OLZ|1|B1|G|404
6OLZ|1|B1|G|405
6OLZ|1|B1|U|406
6OLZ|1|B1|G|407
6OLZ|1|B1|A|408
6OLZ|1|B1|C|409
6OLZ|1|B1|G|410
*
6OLZ|1|B1|C|430
6OLZ|1|B1|G|431
6OLZ|1|B1|G|432

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BE

40S ribosomal protein S4, Y isoform 1

Chain BI

40S ribosomal protein S8

Chain BJ

40S ribosomal protein S9

Chain BL

40S ribosomal protein S11

Chain BX

40S ribosomal protein S23