J4_6OLZ_015
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAUAG*CAG*CGUGUCC*GUC
- Length
- 18 nucleotides
- Bulged bases
- 6OLZ|1|Bv|U|47, 6OLZ|1|Bv|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6OLZ_015 not in the Motif Atlas
- Homologous match to J4_4WT8_030
- Geometric discrepancy: 0.2937
- The information below is about J4_4WT8_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLZ|1|Bv|G|6
6OLZ|1|Bv|A|7
6OLZ|1|Bv|U|8
6OLZ|1|Bv|A|9
6OLZ|1|Bv|G|10
*
6OLZ|1|Bv|C|25
6OLZ|1|Bv|A|26
6OLZ|1|Bv|G|27
*
6OLZ|1|Bv|C|43
6OLZ|1|Bv|G|44
6OLZ|1|Bv|U|45
6OLZ|1|Bv|G|46
6OLZ|1|Bv|U|47
6OLZ|1|Bv|C|48
6OLZ|1|Bv|C|49
*
6OLZ|1|Bv|G|65
6OLZ|1|Bv|U|66
6OLZ|1|Bv|C|67
Current chains
- Chain Bv
- tRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain AI
- 60S ribosomal protein L10
- Chain B1
- Small subunit ribosomal RNA; SSU rRNA
- Chain BZ
- 40S ribosomal protein S25
Coloring options: