J4_6OLZ_020

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUGC*GCGGG*CUCUUAAGGUAGC*GCAUGAAUG

Length

31 nucleotides

Bulged bases

6OLZ|1|A2|U|3789

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLZ|1|A2|C|3667
6OLZ|1|A2|U|3668
6OLZ|1|A2|G|3669
6OLZ|1|A2|C|3670
*
6OLZ|1|A2|G|3722
6OLZ|1|A2|C|3723
6OLZ|1|A2|G|3724
6OLZ|1|A2|G|3725
6OLZ|1|A2|G|3726
*
6OLZ|1|A2|C|3740
6OLZ|1|A2|U|3741
6OLZ|1|A2|C|3742
6OLZ|1|A2|U|3743
6OLZ|1|A2|U|3744
6OLZ|1|A2|A|3745
6OLZ|1|A2|A|3746
6OLZ|1|A2|G|3747
6OLZ|1|A2|G|3748
6OLZ|1|A2|U|3749
6OLZ|1|A2|A|3750
6OLZ|1|A2|G|3751
6OLZ|1|A2|C|3752
*
6OLZ|1|A2|G|3782
6OLZ|1|A2|C|3783
6OLZ|1|A2|A|3784
6OLZ|1|A2|U|3785
6OLZ|1|A2|G|3786
6OLZ|1|A2|A|3787
6OLZ|1|A2|A|3788
6OLZ|1|A2|U|3789
6OLZ|1|A2|G|3790

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain An

60S ribosomal protein L41

Chain B1

Small subunit ribosomal RNA; SSU rRNA

Chain Bv

Transfer RNA; tRNA