J4_6OM0_003
3D structure
- PDB id
- 6OM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUCUUGGGAGCGGGCGUCCCCGCCC*GCAUUU*AAUGGAAUAGG*CAUGAU
- Length
- 48 nucleotides
- Bulged bases
- 6OM0|1|S2|U|688, 6OM0|1|S2|G|698, 6OM0|1|S2|C|730, 6OM0|1|S2|G|731, 6OM0|1|S2|U|732, 6OM0|1|S2|C|733, 6OM0|1|S2|C|738, 6OM0|1|S2|C|739, 6OM0|1|S2|C|797, 6OM0|1|S2|A|798, 6OM0|1|S2|G|867, 6OM0|1|S2|G|868, 6OM0|1|S2|U|871, 6OM0|1|S2|G|873, 6OM0|1|S2|A|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OM0|1|S2|A|685
6OM0|1|S2|U|686
6OM0|1|S2|C|687
6OM0|1|S2|U|688
6OM0|1|S2|U|689
6OM0|1|S2|G|690
6OM0|1|S2|G|691
6OM0|1|S2|G|692
6OM0|1|S2|A|693
6OM0|1|S2|G|694
6OM0|1|S2|C|695
6OM0|1|S2|G|696
6OM0|1|S2|G|697
6OM0|1|S2|G|698
6OM0|1|S2|C|730
6OM0|1|S2|G|731
6OM0|1|S2|U|732
6OM0|1|S2|C|733
6OM0|1|S2|C|734
6OM0|1|S2|C|735
6OM0|1|S2|C|736
6OM0|1|S2|G|737
6OM0|1|S2|C|738
6OM0|1|S2|C|739
6OM0|1|S2|C|746
*
6OM0|1|S2|G|796
6OM0|1|S2|C|797
6OM0|1|S2|A|798
6OM0|1|S2|U|799
6OM0|1|S2|U|800
6OM0|1|S2|U|801
*
6OM0|1|S2|A|864
6OM0|1|S2|A|865
6OM0|1|S2|U|866
6OM0|1|S2|G|867
6OM0|1|S2|G|868
6OM0|1|S2|A|869
6OM0|1|S2|A|870
6OM0|1|S2|U|871
6OM0|1|S2|A|872
6OM0|1|S2|G|873
6OM0|1|S2|G|874
*
6OM0|1|S2|C|912
6OM0|1|S2|A|913
6OM0|1|S2|U|914
6OM0|1|S2|G|915
6OM0|1|S2|A|916
6OM0|1|S2|U|917
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain S
- 60S ribosomal protein L19
- Chain SH
- 40S ribosomal protein S7
- Chain SL
- 40S ribosomal protein S11
- Chain SN
- 40S ribosomal protein S13
- Chain SW
- 40S ribosomal protein S15a
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