J4_6ORD_030

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGGC*GAC*GGAAG*CGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORD|1|YA|G|2642
6ORD|1|YA|G|2643
6ORD|1|YA|G|2644
6ORD|1|YA|G|2645
6ORD|1|YA|C|2646
*
6ORD|1|YA|G|2674
6ORD|1|YA|A|2675
6ORD|1|YA|C|2676
*
6ORD|1|YA|G|2731
6ORD|1|YA|G|2732
6ORD|1|YA|A|2733
6ORD|1|YA|A|2734
6ORD|1|YA|G|2735
*
6ORD|1|YA|C|2769
6ORD|1|YA|G|2770
6ORD|1|YA|C|2771
6ORD|1|YA|C|2772

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YE

50S ribosomal protein L3

Chain YN

50S ribosomal protein L13

Chain YO

50S ribosomal protein L14