J4_6ORL_008

3D structure

PDB id

6ORL (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 pre-accommodated 70S complex at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AACUG*CACAGC*GUGAC*GUAAU

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORL|1|1|A|1772
6ORL|1|1|A|1773
6ORL|1|1|C|1774
6ORL|1|1|U|1775
6ORL|1|1|G|1776
*
6ORL|1|1|C|1788
6ORL|1|1|A|1789
6ORL|1|1|C|1790
6ORL|1|1|A|1791
6ORL|1|1|G|1792
6ORL|1|1|C|1793
*
6ORL|1|1|G|1826
6ORL|1|1|U|1827
6ORL|1|1|G|1828
6ORL|1|1|A|1829
6ORL|1|1|C|1830
*
6ORL|1|1|G|1975
6ORL|1|1|U|1976
6ORL|1|1|A|1977
6ORL|1|1|A|1978
6ORL|1|1|U|1979

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain B

50S ribosomal protein L2