J4_6ORL_014
3D structure
- PDB id
- 6ORL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF1 pre-accommodated 70S complex at 24 ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGUAAAGCG*CGAAAG*CCGUAAACGAUG*CCG
- Length
- 30 nucleotides
- Bulged bases
- 6ORL|1|2|A|572, 6ORL|1|2|C|576, 6ORL|1|2|A|815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ORL|1|2|C|569
6ORL|1|2|G|570
6ORL|1|2|U|571
6ORL|1|2|A|572
6ORL|1|2|A|573
6ORL|1|2|A|574
6ORL|1|2|G|575
6ORL|1|2|C|576
6ORL|1|2|G|577
*
6ORL|1|2|C|764
6ORL|1|2|G|765
6ORL|1|2|A|766
6ORL|1|2|A|767
6ORL|1|2|A|768
6ORL|1|2|G|769
*
6ORL|1|2|C|810
6ORL|1|2|C|811
6ORL|1|2|G|812
6ORL|1|2|U|813
6ORL|1|2|A|814
6ORL|1|2|A|815
6ORL|1|2|A|816
6ORL|1|2|C|817
6ORL|1|2|G|818
6ORL|1|2|A|819
6ORL|1|2|U|820
6ORL|1|2|G|821
*
6ORL|1|2|C|879
6ORL|1|2|C|880
6ORL|1|2|G|881
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain m
- 30S ribosomal protein S8
- Chain q
- 30S ribosomal protein S12
- Chain t
- 30S ribosomal protein S15
- Chain v
- 30S ribosomal protein S17
- Chain z
- 30S ribosomal protein S21
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