J4_6ORL_016

3D structure

PDB id

6ORL (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 pre-accommodated 70S complex at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGAG*CAUAACG*CCAAAG*UGCC

Length

21 nucleotides

Bulged bases

6ORL|1|2|C|183, 6ORL|1|2|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORL|1|2|G|141
6ORL|1|2|G|142
6ORL|1|2|A|143
6ORL|1|2|G|144
*
6ORL|1|2|C|178
6ORL|1|2|A|179
6ORL|1|2|U|180
6ORL|1|2|A|181
6ORL|1|2|A|182
6ORL|1|2|C|183
6ORL|1|2|G|184
*
6ORL|1|2|C|193
6ORL|1|2|C|194
6ORL|1|2|A|195
6ORL|1|2|A|196
6ORL|1|2|A|197
6ORL|1|2|G|198
*
6ORL|1|2|U|219
6ORL|1|2|G|220
6ORL|1|2|C|221
6ORL|1|2|C|222

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20