J4_6QNQ_030
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GG(4SU)GG*CGUC*GAAG(7MG)UCG*CCC
- Length
- 20 nucleotides
- Bulged bases
- 6QNQ|1|2L|4SU|8, 6QNQ|1|2L|U|48, 6QNQ|1|2L|C|49
- QA status
- Modified nucleotides: 4SU, 7MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6QNQ|1|2L|G|6
6QNQ|1|2L|G|7
6QNQ|1|2L|4SU|8
6QNQ|1|2L|G|9
6QNQ|1|2L|G|10
*
6QNQ|1|2L|C|26
6QNQ|1|2L|G|27
6QNQ|1|2L|U|28
6QNQ|1|2L|C|29
*
6QNQ|1|2L|G|43
6QNQ|1|2L|A|44
6QNQ|1|2L|A|45
6QNQ|1|2L|G|46
6QNQ|1|2L|7MG|47
6QNQ|1|2L|U|48
6QNQ|1|2L|C|49
6QNQ|1|2L|G|50
*
6QNQ|1|2L|C|66
6QNQ|1|2L|C|67
6QNQ|1|2L|C|68
Current chains
- Chain 2L
- E. coli tRNAfMet
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 45
- 50S ribosomal protein L16
- Chain 4A
- 30S ribosomal protein S13
- Chain E5
- 50S ribosomal protein L27
Coloring options: