J4_6RM3_002

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAU*AG*UUUAAAUUAAAG*CAAUUUU

Length

24 nucleotides

Bulged bases

6RM3|1|L50|U|1419, 6RM3|1|L50|U|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RM3|1|L50|A|1134
6RM3|1|L50|A|1135
6RM3|1|L50|U|1136
*
6RM3|1|L50|A|1147
6RM3|1|L50|G|1148
*
6RM3|1|L50|U|1413
6RM3|1|L50|U|1414
6RM3|1|L50|U|1415
6RM3|1|L50|A|1416
6RM3|1|L50|A|1417
6RM3|1|L50|A|1418
6RM3|1|L50|U|1419
6RM3|1|L50|U|1420
6RM3|1|L50|A|1421
6RM3|1|L50|A|1422
6RM3|1|L50|A|1423
6RM3|1|L50|G|1424
*
6RM3|1|L50|C|1705
6RM3|1|L50|A|1706
6RM3|1|L50|A|1707
6RM3|1|L50|U|1708
6RM3|1|L50|U|1709
6RM3|1|L50|U|1710
6RM3|1|L50|U|1711

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LB0

uL3

Chain LDD

eL31

Chain LP0

uL22

Chain LR0

eL19