J4_6RM3_003

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUUU*AGUGAA*UU*AACCGUAC

Length

21 nucleotides

Bulged bases

6RM3|1|L50|G|1182

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RM3|1|L50|G|1160
6RM3|1|L50|G|1161
6RM3|1|L50|U|1162
6RM3|1|L50|U|1163
6RM3|1|L50|U|1164
*
6RM3|1|L50|A|1179
6RM3|1|L50|G|1180
6RM3|1|L50|U|1181
6RM3|1|L50|G|1182
6RM3|1|L50|A|1183
6RM3|1|L50|A|1184
*
6RM3|1|L50|U|1227
6RM3|1|L50|U|1228
*
6RM3|1|L50|A|1367
6RM3|1|L50|A|1368
6RM3|1|L50|C|1369
6RM3|1|L50|C|1370
6RM3|1|L50|G|1371
6RM3|1|L50|U|1372
6RM3|1|L50|A|1373
6RM3|1|L50|C|1374

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LGG

eL34

Chain LHH

uL29

Chain LJJ

eL37

Chain LLL

eL39

Chain LR0

eL19

Chain LX0

uL23

Chain LXX

msL1