J4_6RM3_009

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAGUAAUAC*GAC*GUAAC*GG

Length

19 nucleotides

Bulged bases

6RM3|1|S60|U|88, 6RM3|1|S60|A|213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RM3|1|S60|C|82
6RM3|1|S60|A|83
6RM3|1|S60|G|84
6RM3|1|S60|U|85
6RM3|1|S60|A|86
6RM3|1|S60|A|87
6RM3|1|S60|U|88
6RM3|1|S60|A|89
6RM3|1|S60|C|90
*
6RM3|1|S60|G|163
6RM3|1|S60|A|164
6RM3|1|S60|C|165
*
6RM3|1|S60|G|211
6RM3|1|S60|U|212
6RM3|1|S60|A|213
6RM3|1|S60|A|214
6RM3|1|S60|C|215
*
6RM3|1|S60|G|237
6RM3|1|S60|G|238

Current chains

Chain S60

16S rRNA

Nearby chains

Chain SE0

eS4

Chain SI0

eS8

Chain SL0

uS17

Chain SX0

uS12