J4_6RM3_012

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUUAAAAAG*CGUAAG*CAGUAAACUAUG*CUC

Length

30 nucleotides

Bulged bases

6RM3|1|S60|A|448, 6RM3|1|S60|A|452, 6RM3|1|S60|A|633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RM3|1|S60|G|445
6RM3|1|S60|U|446
6RM3|1|S60|U|447
6RM3|1|S60|A|448
6RM3|1|S60|A|449
6RM3|1|S60|A|450
6RM3|1|S60|A|451
6RM3|1|S60|A|452
6RM3|1|S60|G|453
*
6RM3|1|S60|C|582
6RM3|1|S60|G|583
6RM3|1|S60|U|584
6RM3|1|S60|A|585
6RM3|1|S60|A|586
6RM3|1|S60|G|587
*
6RM3|1|S60|C|628
6RM3|1|S60|A|629
6RM3|1|S60|G|630
6RM3|1|S60|U|631
6RM3|1|S60|A|632
6RM3|1|S60|A|633
6RM3|1|S60|A|634
6RM3|1|S60|C|635
6RM3|1|S60|U|636
6RM3|1|S60|A|637
6RM3|1|S60|U|638
6RM3|1|S60|G|639
*
6RM3|1|S60|C|696
6RM3|1|S60|U|697
6RM3|1|S60|C|698

Current chains

Chain S60

16S rRNA

Nearby chains

Chain SAA

eS26

Chain SL0

uS17

Chain SN0

uS15

Chain SW0

uS8

Chain SX0

uS12