J4_6SKG_014

3D structure

PDB id

6SKG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GAAG*CG*CAG*CC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKG|1|BA|G|2747
6SKG|1|BA|A|2748
6SKG|1|BA|A|2749
6SKG|1|BA|G|2750
*
6SKG|1|BA|C|2780
6SKG|1|BA|G|2781
*
6SKG|1|BA|C|2834
6SKG|1|BA|A|2835
6SKG|1|BA|G|2836
*
6SKG|1|BA|C|2872
6SKG|1|BA|C|2873

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BK

50S ribosomal protein L13

Chain BL

50S ribosomal protein L14