J4_6SPC_004

3D structure

PDB id

6SPC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

UG*CAUACGU*AGAAAGU*ACG

Length

19 nucleotides

Bulged bases

6SPC|1|a|A|191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPC|1|a|U|137
6SPC|1|a|G|138
*
6SPC|1|a|C|172
6SPC|1|a|A|173
6SPC|1|a|U|174
6SPC|1|a|A|175
6SPC|1|a|C|176
6SPC|1|a|G|177
6SPC|1|a|U|178
*
6SPC|1|a|A|187
6SPC|1|a|G|188
6SPC|1|a|A|189
6SPC|1|a|A|190
6SPC|1|a|A|191
6SPC|1|a|G|192
6SPC|1|a|U|193
*
6SPC|1|a|A|212
6SPC|1|a|C|213
6SPC|1|a|G|214

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20