J4_6SPE_002

3D structure

PDB id

6SPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 30s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UG*CAUACGUC*GAGAAAG*CG

Length

19 nucleotides

Bulged bases

6SPE|1|a|A|191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPE|1|a|U|137
6SPE|1|a|G|138
*
6SPE|1|a|C|172
6SPE|1|a|A|173
6SPE|1|a|U|174
6SPE|1|a|A|175
6SPE|1|a|C|176
6SPE|1|a|G|177
6SPE|1|a|U|178
6SPE|1|a|C|179
*
6SPE|1|a|G|186
6SPE|1|a|A|187
6SPE|1|a|G|188
6SPE|1|a|A|189
6SPE|1|a|A|190
6SPE|1|a|A|191
6SPE|1|a|G|192
*
6SPE|1|a|C|213
6SPE|1|a|G|214

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20