J4_6SWA_003
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 6SWA|1|q|C|2416
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SWA|1|q|G|2385
6SWA|1|q|G|2386
6SWA|1|q|U|2387
6SWA|1|q|U|2388
6SWA|1|q|C|2389
*
6SWA|1|q|G|2413
6SWA|1|q|G|2414
6SWA|1|q|U|2415
6SWA|1|q|C|2416
6SWA|1|q|A|2417
6SWA|1|q|G|2418
*
6SWA|1|q|U|2517
6SWA|1|q|C|2518
*
6SWA|1|q|G|2756
6SWA|1|q|G|2757
6SWA|1|q|C|2758
6SWA|1|q|C|2759
6SWA|1|q|G|2760
6SWA|1|q|U|2761
6SWA|1|q|A|2762
6SWA|1|q|C|2763
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain V
- 60S ribosomal protein L23a
- Chain e
- 60S ribosomal protein L34
- Chain f
- 60S ribosomal protein L35
- Chain h
- 60S ribosomal protein L37
- Chain i
- 60S ribosomal protein L38
- Chain j
- 60S ribosomal protein L39
- Chain o
- 60S ribosomal protein L19
- Chain r
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain t
- Proliferation-associated protein 2G4
Coloring options: