J4_6SWA_008
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUCUG*CG*CUUAAGGUAG*UGAAUGGA
- Length
- 25 nucleotides
- Bulged bases
- 6SWA|1|q|U|3789
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SWA|1|q|U|3665
6SWA|1|q|U|3666
6SWA|1|q|C|3667
6SWA|1|q|U|3668
6SWA|1|q|G|3669
*
6SWA|1|q|C|3723
6SWA|1|q|G|3724
*
6SWA|1|q|C|3742
6SWA|1|q|U|3743
6SWA|1|q|U|3744
6SWA|1|q|A|3745
6SWA|1|q|A|3746
6SWA|1|q|G|3747
6SWA|1|q|G|3748
6SWA|1|q|U|3749
6SWA|1|q|A|3750
6SWA|1|q|G|3751
*
6SWA|1|q|U|3785
6SWA|1|q|G|3786
6SWA|1|q|A|3787
6SWA|1|q|A|3788
6SWA|1|q|U|3789
6SWA|1|q|G|3790
6SWA|1|q|G|3791
6SWA|1|q|A|3792
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain l
- 60S ribosomal protein L41
- Chain n
- 60S ribosomal protein L37a
Coloring options: