J4_6T83_001

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UC*GAGUCGA*UCUAAGUG*UAAA

Length

21 nucleotides

Bulged bases

6T83|1|1b|U|298

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|1b|U|112
6T83|1|1b|C|113
*
6T83|1|1b|G|267
6T83|1|1b|A|268
6T83|1|1b|G|269
6T83|1|1b|U|270
6T83|1|1b|C|271
6T83|1|1b|G|272
6T83|1|1b|A|273
*
6T83|1|1b|U|292
6T83|1|1b|C|293
6T83|1|1b|U|294
6T83|1|1b|A|295
6T83|1|1b|A|296
6T83|1|1b|G|297
6T83|1|1b|U|298
6T83|1|1b|G|299
*
6T83|1|1b|U|316
6T83|1|1b|A|317
6T83|1|1b|A|318
6T83|1|1b|A|319

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain Ly

60S ribosomal protein L13-A

Chain Ny

60S ribosomal protein L15-A

Chain hb

60S ribosomal protein L35-A

Chain ib

60S ribosomal protein L36-A