J4_6T83_008

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUAAGG*CUUGAU*ACC*GUG

Length

18 nucleotides

Bulged bases

6T83|1|1b|A|2657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|1b|C|2654
6T83|1|1b|U|2655
6T83|1|1b|A|2656
6T83|1|1b|A|2657
6T83|1|1b|G|2658
6T83|1|1b|G|2659
*
6T83|1|1b|C|2711
6T83|1|1b|U|2712
6T83|1|1b|U|2713
6T83|1|1b|G|2714
6T83|1|1b|A|2715
6T83|1|1b|U|2716
*
6T83|1|1b|A|2740
6T83|1|1b|C|2741
6T83|1|1b|C|2742
*
6T83|1|1b|G|2751
6T83|1|1b|U|2752
6T83|1|1b|G|2753

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain Dy

60S ribosomal protein L5

Chain Ty

60S ribosomal protein L21-A

Chain by

60S ribosomal protein L29

Chain ob

60S ribosomal protein L42-A