J4_6UCQ_020

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GCAAGUUGG*UGC*GCCGCAGUGAACAGG*CGC

Length

30 nucleotides

Bulged bases

6UCQ|1|2A|G|1758, 6UCQ|1|2A|G|1763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UCQ|1|2A|G|1674
6UCQ|1|2A|C|1675
6UCQ|1|2A|A|1676
6UCQ|1|2A|A|1677
6UCQ|1|2A|G|1678
6UCQ|1|2A|U|1679
6UCQ|1|2A|U|1680
6UCQ|1|2A|G|1681
6UCQ|1|2A|G|1682
*
6UCQ|1|2A|U|1706
6UCQ|1|2A|G|1707
6UCQ|1|2A|C|1708
*
6UCQ|1|2A|G|1750
6UCQ|1|2A|C|1751
6UCQ|1|2A|C|1752
6UCQ|1|2A|G|1753
6UCQ|1|2A|C|1754
6UCQ|1|2A|A|1755
6UCQ|1|2A|G|1756
6UCQ|1|2A|U|1757
6UCQ|1|2A|G|1758
6UCQ|1|2A|A|1759
6UCQ|1|2A|A|1760
6UCQ|1|2A|C|1761
6UCQ|1|2A|A|1762
6UCQ|1|2A|G|1763
6UCQ|1|2A|G|1764
*
6UCQ|1|2A|C|1988
6UCQ|1|2A|G|1989
6UCQ|1|2A|C|1990

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2E

50S ribosomal protein L3

Chain 2O

50S ribosomal protein L14

Chain 2T

50S ribosomal protein L19

Chain 2a

Small subunit ribosomal RNA; SSU rRNA