J4_6UZ7_003
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGGA*UACACUG*CGUGCUGG*CGAGGAA
- Length
- 26 nucleotides
- Bulged bases
- 6UZ7|1|2|U|1471, 6UZ7|1|2|U|1533, 6UZ7|1|2|G|1537
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6UZ7|1|2|U|1167
6UZ7|1|2|G|1168
6UZ7|1|2|G|1169
6UZ7|1|2|A|1170
*
6UZ7|1|2|U|1466
6UZ7|1|2|A|1467
6UZ7|1|2|C|1468
6UZ7|1|2|A|1469
6UZ7|1|2|C|1470
6UZ7|1|2|U|1471
6UZ7|1|2|G|1472
*
6UZ7|1|2|C|1531
6UZ7|1|2|G|1532
6UZ7|1|2|U|1533
6UZ7|1|2|G|1534
6UZ7|1|2|C|1535
6UZ7|1|2|U|1536
6UZ7|1|2|G|1537
6UZ7|1|2|G|1538
*
6UZ7|1|2|C|1569
6UZ7|1|2|G|1570
6UZ7|1|2|A|1571
6UZ7|1|2|G|1572
6UZ7|1|2|G|1573
6UZ7|1|2|A|1574
6UZ7|1|2|A|1575
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain F
- KLLA0D10659p
- Chain Q
- 40S ribosomal protein S16
- Chain S
- KLLA0B01562p
- Chain T
- KLLA0A07194p
- Chain Z
- 40S ribosomal protein S25
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