J4_6V3A_010

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GAUC*GAC*GGAAG*UAC

Length

15 nucleotides

Bulged bases

6V3A|1|AN1|A|2729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V3A|1|AN1|G|2639
6V3A|1|AN1|A|2640
6V3A|1|AN1|U|2641
6V3A|1|AN1|C|2642
*
6V3A|1|AN1|G|2670
6V3A|1|AN1|A|2671
6V3A|1|AN1|C|2672
*
6V3A|1|AN1|G|2727
6V3A|1|AN1|G|2728
6V3A|1|AN1|A|2729
6V3A|1|AN1|A|2730
6V3A|1|AN1|G|2731
*
6V3A|1|AN1|U|2765
6V3A|1|AN1|A|2766
6V3A|1|AN1|C|2767

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain I

50S ribosomal protein L13

Chain J

50S ribosomal protein L14