J4_6V3A_012

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

UG*CAUACGU*AGAAAG*CG

Length

17 nucleotides

Bulged bases

6V3A|1|sN1|A|193

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V3A|1|sN1|U|139
6V3A|1|sN1|G|140
*
6V3A|1|sN1|C|174
6V3A|1|sN1|A|175
6V3A|1|sN1|U|176
6V3A|1|sN1|A|177
6V3A|1|sN1|C|178
6V3A|1|sN1|G|179
6V3A|1|sN1|U|180
*
6V3A|1|sN1|A|189
6V3A|1|sN1|G|190
6V3A|1|sN1|A|191
6V3A|1|sN1|A|192
6V3A|1|sN1|A|193
6V3A|1|sN1|G|194
*
6V3A|1|sN1|C|215
6V3A|1|sN1|G|216

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20