J4_6VLZ_003

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VLZ|1|A|G|2492
6VLZ|1|A|C|2493
6VLZ|1|A|C|2494
6VLZ|1|A|U|2495
6VLZ|1|A|G|2496
*
6VLZ|1|A|C|2508
6VLZ|1|A|A|2509
6VLZ|1|A|U|2510
6VLZ|1|A|C|2511
6VLZ|1|A|A|2512
6VLZ|1|A|C|2513
*
6VLZ|1|A|G|2537
6VLZ|1|A|C|2538
6VLZ|1|A|A|2539
6VLZ|1|A|C|2540
6VLZ|1|A|C|2541
6VLZ|1|A|G|2542
*
6VLZ|1|A|C|2637
6VLZ|1|A|U|2638
6VLZ|1|A|C|2639
6VLZ|1|A|C|2640
6VLZ|1|A|A|2641
6VLZ|1|A|C|2642

Current chains

Chain A

16s rRNA

Nearby chains

Chain A3

Aurora kinase A-interacting protein

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

39S ribosomal protein L2, mitochondrial