J4_6VLZ_008

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GAGUUCACC*GAACA*UAG*CC

Length

19 nucleotides

Bulged bases

6VLZ|1|AA|U|721, 6VLZ|1|AA|C|722, 6VLZ|1|AA|A|723

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VLZ|1|AA|G|717
6VLZ|1|AA|A|718
6VLZ|1|AA|G|719
6VLZ|1|AA|U|720
6VLZ|1|AA|U|721
6VLZ|1|AA|C|722
6VLZ|1|AA|A|723
6VLZ|1|AA|C|724
6VLZ|1|AA|C|725
*
6VLZ|1|AA|G|749
6VLZ|1|AA|A|750
6VLZ|1|AA|A|751
6VLZ|1|AA|C|752
6VLZ|1|AA|A|753
*
6VLZ|1|AA|U|789
6VLZ|1|AA|A|790
6VLZ|1|AA|G|791
*
6VLZ|1|AA|C|797
6VLZ|1|AA|C|798

Current chains

Chain AA

12s rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AN

28S ribosomal protein S17, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial