J4_6VMI_005
3D structure
- PDB id
- 6VMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- AAA*UA*UCCCCCGUA*UAGUAUUAU
- Length
- 23 nucleotides
- Bulged bases
- 6VMI|1|A|C|3168, 6VMI|1|A|C|3172, 6VMI|1|A|U|3197, 6VMI|1|A|U|3200
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6VMI|1|A|A|3111
6VMI|1|A|A|3112
6VMI|1|A|A|3113
*
6VMI|1|A|U|3143
6VMI|1|A|A|3144
*
6VMI|1|A|U|3167
6VMI|1|A|C|3168
6VMI|1|A|C|3169
6VMI|1|A|C|3170
6VMI|1|A|C|3171
6VMI|1|A|C|3172
6VMI|1|A|G|3173
6VMI|1|A|U|3174
6VMI|1|A|A|3175
*
6VMI|1|A|U|3194
6VMI|1|A|A|3195
6VMI|1|A|G|3196
6VMI|1|A|U|3197
6VMI|1|A|A|3198
6VMI|1|A|U|3199
6VMI|1|A|U|3200
6VMI|1|A|A|3201
6VMI|1|A|U|3202
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain K
- 39S ribosomal protein L13, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: