J4_6VMI_008

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GAGUUCACC*GAACA*UAG*CC

Length

19 nucleotides

Bulged bases

6VMI|1|AA|C|722

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|AA|G|717
6VMI|1|AA|A|718
6VMI|1|AA|G|719
6VMI|1|AA|U|720
6VMI|1|AA|U|721
6VMI|1|AA|C|722
6VMI|1|AA|A|723
6VMI|1|AA|C|724
6VMI|1|AA|C|725
*
6VMI|1|AA|G|749
6VMI|1|AA|A|750
6VMI|1|AA|A|751
6VMI|1|AA|C|752
6VMI|1|AA|A|753
*
6VMI|1|AA|U|789
6VMI|1|AA|A|790
6VMI|1|AA|G|791
*
6VMI|1|AA|C|797
6VMI|1|AA|C|798

Current chains

Chain AA

12s rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AN

28S ribosomal protein S17, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial