J4_6W6K_002

3D structure

PDB id

6W6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Activated-high-Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAGGG*CGCAUAACG*CCAAAG*UGCC

Length

25 nucleotides

Bulged bases

6W6K|1|A|C|183, 6W6K|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6K|1|A|G|141
6W6K|1|A|G|142
6W6K|1|A|A|143
6W6K|1|A|G|144
6W6K|1|A|G|145
6W6K|1|A|G|146
*
6W6K|1|A|C|176
6W6K|1|A|G|177
6W6K|1|A|C|178
6W6K|1|A|A|179
6W6K|1|A|U|180
6W6K|1|A|A|181
6W6K|1|A|A|182
6W6K|1|A|C|183
6W6K|1|A|G|184
*
6W6K|1|A|C|193
6W6K|1|A|C|194
6W6K|1|A|A|195
6W6K|1|A|A|196
6W6K|1|A|A|197
6W6K|1|A|G|198
*
6W6K|1|A|U|219
6W6K|1|A|G|220
6W6K|1|A|C|221
6W6K|1|A|C|222

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20