J4_6WD7_013
3D structure
- PDB id
- 6WD7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGUAAAGCG*CGAAAG*CCGUAAACGAUG*CCG
- Length
- 30 nucleotides
- Bulged bases
- 6WD7|1|3|A|572, 6WD7|1|3|C|576, 6WD7|1|3|A|815, 6WD7|1|3|C|817, 6WD7|1|3|G|818, 6WD7|1|3|A|819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WD7|1|3|C|569
6WD7|1|3|G|570
6WD7|1|3|U|571
6WD7|1|3|A|572
6WD7|1|3|A|573
6WD7|1|3|A|574
6WD7|1|3|G|575
6WD7|1|3|C|576
6WD7|1|3|G|577
*
6WD7|1|3|C|764
6WD7|1|3|G|765
6WD7|1|3|A|766
6WD7|1|3|A|767
6WD7|1|3|A|768
6WD7|1|3|G|769
*
6WD7|1|3|C|810
6WD7|1|3|C|811
6WD7|1|3|G|812
6WD7|1|3|U|813
6WD7|1|3|A|814
6WD7|1|3|A|815
6WD7|1|3|A|816
6WD7|1|3|C|817
6WD7|1|3|G|818
6WD7|1|3|A|819
6WD7|1|3|U|820
6WD7|1|3|G|821
*
6WD7|1|3|C|879
6WD7|1|3|C|880
6WD7|1|3|G|881
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- 30S ribosomal protein S5
- Chain M
- 30S ribosomal protein S8
- Chain Q
- 30S ribosomal protein S12
- Chain T
- 30S ribosomal protein S15
- Chain V
- 30S ribosomal protein S17
- Chain Z
- 30S ribosomal protein S21
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