J4_6WLT_012

3D structure

PDB id

6WLT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Apo V. cholerae glycine riboswitch models, 4.8 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

GGAGAGUG*CCG*UG*CGAGGAC

Length

20 nucleotides

Bulged bases

6WLT|12|A|G|19

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WLT|12|A|G|14
6WLT|12|A|G|15
6WLT|12|A|A|16
6WLT|12|A|G|17
6WLT|12|A|A|18
6WLT|12|A|G|19
6WLT|12|A|U|20
6WLT|12|A|G|21
*
6WLT|12|A|C|58
6WLT|12|A|C|59
6WLT|12|A|G|60
*
6WLT|12|A|U|83
6WLT|12|A|G|84
*
6WLT|12|A|C|119
6WLT|12|A|G|120
6WLT|12|A|A|121
6WLT|12|A|G|122
6WLT|12|A|G|123
6WLT|12|A|A|124
6WLT|12|A|C|125

Current chains

Chain A

RNA (231-MER)

Nearby chains