J4_6WNW_007

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUUC*GGUGAG*CU*AAUCGUAC

Length

21 nucleotides

Bulged bases

6WNW|1|4|G|1469

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WNW|1|4|G|1438
6WNW|1|4|G|1439
6WNW|1|4|U|1440
6WNW|1|4|U|1441
6WNW|1|4|C|1442
*
6WNW|1|4|G|1466
6WNW|1|4|G|1467
6WNW|1|4|U|1468
6WNW|1|4|G|1469
6WNW|1|4|A|1470
6WNW|1|4|G|1471
*
6WNW|1|4|C|1532
6WNW|1|4|U|1533
*
6WNW|1|4|A|1725
6WNW|1|4|A|1726
6WNW|1|4|U|1727
6WNW|1|4|C|1728
6WNW|1|4|G|1729
6WNW|1|4|U|1730
6WNW|1|4|A|1731
6WNW|1|4|C|1732

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L34

Chain t

50S ribosomal protein L23